How To -Glycolysis - Biochemistry
We are starting into a new semester and that means I am getting into Biochemistry II with you guys.
Main Topic this semester will be the metabolism and from experience I can say, the most difficult part is to remember all the different steps in the many metabolic cycles our body needs to stay functioning.
Glycolysis happens generally in 10 steps and is the process of breaking down glucose into smaller sugars
The reaction itself takes place in the cytosol and after investing 2 ATP you get 4 ATP and 2 NADH
First Step: Phosphorylation of Glucose
Enzymes: Hexokinase aka Glucokinase
Components: Glucose, ATP
Hexokinase catalyses under exclusion of water the two components glucose + ATP , the product is now negatively charged and therefor caught in the cytosol
Second Step: Isomerization
Enzymes: Glucosephosphate-Isomerase
Components: Glucose-6-Phosphate
This reaction is essential for step four, because only from fructose you can derive two C3-molecules.
Without isomerization, we would get a 2C-molecule and a 4C-molecule.
This step also is stereospecific.
Third Step: Phosphorylation of Fructose-6-Phosphate
Enzymes: Phosphofructokinase
Components: Fructose-6-Phosphate, ATP
In this step, our product is being phosphorylated for the second time, from Fructose-6-Phosphate + ATP toFructose-1,6-Bisphosphate + ADP
Phosphofructokinase coordinates the speed in glycolysis - VERY INTERESTING
Fourth Step: Aldol split
Enzymes: Aldolase
Components: Fructose-1,6-Bisphosphate
The reaction produces Dihydrxyacetonphosphat (DHAP) + Glyerinaldehyd-3-Phosphate (GAP)
NOTE: DHAP & GAP are isomers of eachother, but future steps in glycolysis can only process GAP
Fifth Step: Isomerization
Enzymes: Triosephosphate-Isomerase aka TIM
Components: DHAP, GAP
This reaction generally favours DHAP, but if the body needs energy, the reaction is gonna favour the production of GAP
TIM catalyses the change of DHAP to GAP and back, with very high efficiency
Sixth Step: Oxidation (Aldehyd group to Acylphosphate)
Enzyme: Glycerinaldehyd-3-Phosphate-Dehydrogenase aka G3PDComponents: Glycerinaldehyd-3-Phosphate, NAD+, PO4 (-III)
Glycerinaldehyd-3-Phosphate + NAD+ + PO4 (-III) are catalysed by G3PD to 1,3-Bisphosphoglycerat + NADH + H+
1,3-Bisphosphoglycerat is a high energy intermediate
Seventh Step: Production of ATP
Enzymes: Phosphoglycerat kinase
Components: 1,3 Bisphosphoglycerat, ADP
This time the kinase doesn't invest, but takes one of the phosphate groups and produces 1 ATP per molecule
So, because we have 2 molecules per 1 glucose molecule, we balance our ATP usage from step 1 and 3 byproducing 2 ATP in this step
Eigth Step: Phosphate relocation
Enzymes: Phosphoglycerat-mutate
Components: 3-Phosphoglycerat
Phosphoglycerat-mutate shifts the phosphate group from the end to the middle of our molecule
3-Phosphoglycerat to 2-Phosphoglycerat
Ninth Step: Dehydration
Enzymes: Enolase
Components: 2-Phosphoglycerat
Enolase catalyses the dehydration from 2-Phosphateglycerat to Phosphoenolpyrovat
This is the second high energy intermediate
Tenth Step: Production of ATP
Enzymes: Pyruvat kinase
Components: Phosphoenolpyruvat, ADP
Thanks to our pyruvat kinase the ADP swoops in and takes the phosphate, creating ATP and the last molecule in glycolysis, pyruvat
Once again, per 1 molecule glucose we get 2 molecule phosphoenolpyruvat - which means in glycolysis we earn a total of 2 ATP and 2 NADH :)
This tutorial was soo difficult to shorten down... I hope it helps though ._.
Main Topic this semester will be the metabolism and from experience I can say, the most difficult part is to remember all the different steps in the many metabolic cycles our body needs to stay functioning.
Glycolysis happens generally in 10 steps and is the process of breaking down glucose into smaller sugars
The reaction itself takes place in the cytosol and after investing 2 ATP you get 4 ATP and 2 NADH
First Step: Phosphorylation of Glucose
Enzymes: Hexokinase aka Glucokinase
Components: Glucose, ATP
Hexokinase catalyses under exclusion of water the two components glucose + ATP , the product is now negatively charged and therefor caught in the cytosol
Second Step: Isomerization
Enzymes: Glucosephosphate-Isomerase
Components: Glucose-6-Phosphate
This reaction is essential for step four, because only from fructose you can derive two C3-molecules.
Without isomerization, we would get a 2C-molecule and a 4C-molecule.
This step also is stereospecific.
Third Step: Phosphorylation of Fructose-6-Phosphate
Enzymes: Phosphofructokinase
Components: Fructose-6-Phosphate, ATP
In this step, our product is being phosphorylated for the second time, from Fructose-6-Phosphate + ATP toFructose-1,6-Bisphosphate + ADP
Phosphofructokinase coordinates the speed in glycolysis - VERY INTERESTING
Fourth Step: Aldol split
Enzymes: Aldolase
Components: Fructose-1,6-Bisphosphate
The reaction produces Dihydrxyacetonphosphat (DHAP) + Glyerinaldehyd-3-Phosphate (GAP)
NOTE: DHAP & GAP are isomers of eachother, but future steps in glycolysis can only process GAP
Fifth Step: Isomerization
Enzymes: Triosephosphate-Isomerase aka TIM
Components: DHAP, GAP
This reaction generally favours DHAP, but if the body needs energy, the reaction is gonna favour the production of GAP
TIM catalyses the change of DHAP to GAP and back, with very high efficiency
Sixth Step: Oxidation (Aldehyd group to Acylphosphate)
Enzyme: Glycerinaldehyd-3-Phosphate-Dehydrogenase aka G3PDComponents: Glycerinaldehyd-3-Phosphate, NAD+, PO4 (-III)
Glycerinaldehyd-3-Phosphate + NAD+ + PO4 (-III) are catalysed by G3PD to 1,3-Bisphosphoglycerat + NADH + H+
1,3-Bisphosphoglycerat is a high energy intermediate
Seventh Step: Production of ATP
Enzymes: Phosphoglycerat kinase
Components: 1,3 Bisphosphoglycerat, ADP
This time the kinase doesn't invest, but takes one of the phosphate groups and produces 1 ATP per molecule
So, because we have 2 molecules per 1 glucose molecule, we balance our ATP usage from step 1 and 3 byproducing 2 ATP in this step
Eigth Step: Phosphate relocation
Enzymes: Phosphoglycerat-mutate
Components: 3-Phosphoglycerat
Phosphoglycerat-mutate shifts the phosphate group from the end to the middle of our molecule
3-Phosphoglycerat to 2-Phosphoglycerat
Ninth Step: Dehydration
Enzymes: Enolase
Components: 2-Phosphoglycerat
Enolase catalyses the dehydration from 2-Phosphateglycerat to Phosphoenolpyrovat
This is the second high energy intermediate
Tenth Step: Production of ATP
Enzymes: Pyruvat kinase
Components: Phosphoenolpyruvat, ADP
Thanks to our pyruvat kinase the ADP swoops in and takes the phosphate, creating ATP and the last molecule in glycolysis, pyruvat
Once again, per 1 molecule glucose we get 2 molecule phosphoenolpyruvat - which means in glycolysis we earn a total of 2 ATP and 2 NADH :)
This tutorial was soo difficult to shorten down... I hope it helps though ._.
Comments
Post a Comment